But what happens if the change of DNA methylation is *near* CTCF site? Our previously suggested model is the 5mC/5hmC/nucleosome switch, which requires the nucleosome as an intermediate that senses DNA modifications and then affects CTCF binding https://t
@benbfly I agree. We also published on DNA methylation being higher in *inter-nucleosome* regions https://t.co/mzzE5NIlAJ. Also there were publications about suppressed mutation rates inside nucleosomes: https://t.co/KRthULTHaP
@EpgntxEinstein @maxvcg @pjie2 @GenomeBrowser @RemoRohs Interesting discussion. When I wanted to check relationship between 5mCs and nucleosomes (which is different inside/outside CpG islands) I took four different datasets of CpG islands (by different cri
@Nucleosome_Bot Sounds similar to our work on the link between nucleosome occupancy and DNA methylation https://t.co/cwpb2xTHTL
@michaelhoffman @cobyviner thank you, indeed, it's a great preprint. Already discussed it on Twitter: https://t.co/h6vISwOrzW
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
RT @Gene_Regulation: We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, us…
We previously showed that 5-formylcytosine (5fC) is associated with positioned nucleosomes https://t.co/zPqpySRCrX, using our ESC nucleosomes and 5fC data from https://t.co/jM5YDOvFC1 The new preprint of Raiber et al explains a mechanism for this effect!
@pjmurphy249 you may be also interested in this https://t.co/zPqpySRCrX where we studied 5mC/5hmC switch mediated by nucleosomes (this project continues)
@bmart87 yes, and in principle I agree with MNase titration to determine "accessibility", we have used it in 2014 as well https://t.co/YQlFbchCcI
@Gene_Regulation This ms misses refs to similar MNase titration in drosophila https://t.co/C7FkjrYnaW and in mESCs https://t.co/0X6sXt8adx
.@hectorleoh Nucleosome repositioning is directly linked to 5mhC in cell differentiation @hectorleoh https://t.co/whGvOpdvwG @KarstenRippe
@canerakdemir On a similar theme: https://t.co/cwpb2xTHTL
Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development http://t.co/wQc0OuCdqi
GenomeResearch: Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem c... http://t.co/RO6TOqgvjg
GenomeResearch: Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem c... http://t.co/KhrFNmdcyJ